BSRC "Alexander Fleming" Publications
2025 - (36)
2025, "Different fibroblast subtypes propel spatially defined ileal inflammation through TNFR1 signalling in murine ileitis.", Nat Commun., 28; 16(1):3023 [PubMed].
2025, "CD55 upregulation in T cells of COVID-19 patients suppresses type-I interferon responses.", Commun Biol., 8(1) :690. [PubMed].
2025, "Dysregulation of γδ intraepithelial lymphocytes precedes Crohn's disease-like ileitis.", Sci Immunol., 10(105) :eadk7429. [PubMed].
2025, "Chromosome-level genome assembly of the Vermillion Snapper (Rhomboplites aurorubens)", Scientific Data,
2025, "Development and validation of a polygenic risk score for height in a Greek cohort: Association with blood pressure measurements.", Frontiers in Genetics, , 2025, 16:1538975 [PubMed].
2025, "A randomized clinical trial of a dietary intervention and mental health associations in adults with increased genetic risk for obesity", Scientific Reports, 2025, 15(1):14188 [PubMed].
2025, "Notch3 regulates pericyte phenotypic plasticity in colorectal cancer.", bioRxiv, PPR1032195, DOI: 10.1101/2025.06.04.657823. [doi].
2025, "Cellular complexity in murine ileitis: Different fibroblasts propel spatially defined ileal inflammation through TNFR1 signalling.", Nat Commun, 16(1): 3023. doi:10.1038/s41467-025-57570-7. [PubMed].
2025, "A communication pipeline for in vivo imaging core facilities.", Laboratory Animals Ltd, [doi].
2025, "RANKL Drives Bone Metastasis in Mammary Cancer: Protective Effects of Anti-Resorptive Treatments.", International Journal of Molecular Sciences, 26(11), 4990; doi.org/10.3390/ijms26114990. [Link].
2025, "Chemical chaperone 4-phenylbutyrate treatment alleviates the kidney phenotype in a mouse model of Alport syndrome with a pathogenic variant in Col4a3.", Kidney Int., 2025 Jun 6: S0085-2538(25)00426-0. doi: 10.1016/j.kint.2025.05.016. Epub ahead of print. [PubMed].
2025, "HDX-MS in micelles and membranes for small molecule and biopharmaceutical development", Current Opinion in Structural Biology, Volume 94, October 2025, 103077 [doi].
2025, "MultiPassMerger: Automated data processing for multipass cyclic ion mobility HDX-MS", Protein Science, 24 May 2025 [doi].
2025, "Small Molecules Targeting the Structural Dynamics of AR-V7 Partially Disordered Proteins Using Deep Ensemble Docking.", Journal of Chemical Theory and Computation., 2025 May 13; 21(9):4898-4909. doi: 10.1021/acs.jctc.5c00171 [Link].
2025, "ProteoSeeker: A Feature-Rich Metagenomic Analysis Tool for Accessible and Comprehensive Metagenomic Exploration. ", Advanced Science., 2025 May; 12(19):e2414877. doi: 10.1002/advs.202414877. [PubMed].
2025, "Optimization of a High-Throughput Screen for Monitoring Disease-Associated Protein Misfolding and Aggregation in Bacteria.", ACS Synthetic Biology., 2025 May 12. doi: 10.1021/acssynbio.5c00166. [PubMed].
2025, "Synergistic and antagonistic activities of IRF8 and FOS enhancer pairs during an immune-cell fate switch.", EMBO J., 2025 Apr; 44(7):2025-2055. [doi].
2025, "invertiaDB: a database of inverted repeats across organismal genomes.", Nucleic Acids Res., 2025 Apr 22; 53(8):gkaf329. doi: 10.1093/nar/gkaf329. [PubMed].
2025, "MPRAbase a Massively Parallel Reporter Assay database", Genome Res., 2025 Apr 22: gr.280387.124. doi: 10.1101/gr.280387.124. [PubMed].
2025, "ERAP1 activity modulates the immunopeptidome but also affects the proteome, metabolism and stress responses in cancer cells.", Mol Cell Proteomics. , 2025 Apr 4 :100964. [PubMed].
2025, "Amplex red assay, a standardized in vitro protocol to quantify the efficacy of autotaxin inhibitors.", STAR Protoc. , 2025 Apr 1; 6(2):103721. [PubMed].
2025, "Advancements in Nanoemulsion-Based Drug Delivery Across Different Administration Routes.", Pharmaceutics., 2025 Mar 5; 17(3):337. doi: 10.3390/pharmaceutics17030337. [PubMed].
2025, "Multimodal SARS-CoV-2 interactome sketches the virus-host spatial organization.", Commun Biol., 2025 Mar 26; 8(1):501. doi: 10.1038/s42003-025-07933-z. [PubMed].
2025, "An optimized protocol for generating fibrotic murine precision-cut lung slices.", STAR Protoc., 2025 Mar 24; 6(2):103711. [PubMed].
2025, "Generation of New Knock-Out Mouse Strains of Lysophosphatidic Acid Receptor 1.", Int J Mol Sci., 2025 Mar 20; 26(6):2811. [PubMed].
2025, "MAFin: Motif Detection in Multiple Alignment Files", Bioinformatics., 2025 Mar 19: btaf125. doi: 10.1093/bioinformatics/btaf125. [PubMed].
2025, "AlphaFold prediction of structural ensembles of disordered proteins.", Nature Communications., 2025 Feb 14; 16(1):1632. doi: 10.1038/s41467-025-56572-9. [PubMed].
2025, "Interaction of TFAP2A with the Ku70/80 complex is crucial for HIF-dependent activation of hypoxia-inducible genes.", FEBS J. , 2025 Feb 24. doi: 10.1111/febs.70025. Online ahead of print. [PubMed].
2025, "Pharmacological targeting of ECM homeostasis, fibroblast activation, and invasion for the treatment of pulmonary fibrosis.", Expert Opin Ther Targets., 2025 Feb 22. [PubMed].
2025, "APNet, an explainable sparse deep learning model to discover differentially active drivers of severe COVID-19", Bioinformatics. , 2025 Feb 8:btaf063. doi: 10.1093/bioinformatics/btaf063. Online ahead of print. [PubMed].
2025, "Differential Signaling Pathways Identified in Aqueous Humor, Anterior Capsule, and Crystalline Lens of Age-Related, Diabetic, and Post-Vitrectomy Cataract.", Proteomes. , 2025 Feb 3; 13(1):7. doi: 10.3390/proteomes13010007. [PubMed].
2025, "Transient interactions between the fuzzy coat and the cross-β core of brain-derived Aβ42 filaments.", Science Advances., 2025 Jan 17; 11(3):eadr7008. doi: 10.1126/sciadv.adr7008. [PubMed].
2025, "Promyelocytic Leukemia Protein (PML) Regulates Stem Cell Pluripotency Through Novel Sumoylation Targets.", Int J Mol Sci., 2025 Jan 28; 26(3):1145. doi: 10.3390/ijms26031145. [PubMed].
2024, "Identification of the shortest species-specific oligonucleotide sequences", Genome Res., 2025 Jan 31. doi: 10.1101/gr.280070.124. Online ahead of print. [PubMed].
2025, "Integrative analysis of patient-derived tumoroids and ex vivo organoid modeling of ARID1A loss in bladder cancer reveals therapeutic molecular targets", Cancer Lett., 2025 Jan 29:217506. doi: 10.1016/j.canlet.2025.217506. Online ahead of print. [PubMed].
2025, "Identification of the shortest species-specific oligonucleotide sequences.", Genome Res., 2025 Jan 2: gr.280070.124. doi: 10.1101/gr.280070.124. Epub ahead of print. [PubMed].
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- BSRC "Alexander Fleming" Publications - 2024
- BSRC "Alexander Fleming" Publications - 2023
- BSRC "Alexander Fleming" Publications - 2022
- BSRC "Alexander Fleming" Publications - 2021
- BSRC "Alexander Fleming" Publications - 2020
- BSRC "Alexander Fleming" Publications - 2019
- BSRC "Alexander Fleming" Publications - 2018
- BSRC "Alexander Fleming" Publications - 2017
- BSRC "Alexander Fleming" Publications - 2016
- BSRC "Alexander Fleming" Publications - 2015
- BSRC "Alexander Fleming" Publications - 2014
- BSRC "Alexander Fleming" Publications - 2013
- BSRC "Alexander Fleming" Publications - 2012
- BSRC "Alexander Fleming" Publications - 2011
- BSRC "Alexander Fleming" Publications - 2010
- BSRC "Alexander Fleming" Publications - 2009
- BSRC "Alexander Fleming" Publications - 2008
- BSRC "Alexander Fleming" Publications - 2007
- BSRC "Alexander Fleming" Publications - 2006
- BSRC "Alexander Fleming" Publications - 2005
- BSRC "Alexander Fleming" Publications - 2004
- BSRC "Alexander Fleming" Publications - 2003
- BSRC "Alexander Fleming" Publications - 2002
- BSRC "Alexander Fleming" Publications - 2001
- BSRC "Alexander Fleming" Publications - 2000
- BSRC "Alexander Fleming" Publications - 1999
- BSRC "Alexander Fleming" Publications - 1998