BSRC "Alexander Fleming" Publications

2024 - (16)

Krithara A, Nentidis A, Vandorou E, Katsimpras G, Almirantis Y, Arnal M, Bunevicius A, Farre-Maduell E, Kassiss M, Konstantakos V, Matis-Mitchell S, Polychronopoulos D, Rodriguez-Pascual J, Samaras EG, Samiotaki M, Sanoudou D, Vozi A, Paliouras G. 2024, "BioASQ Synergy: A Dialogue between QA systems and biomedical experts for promoting COVID-19 research", J Am Med Inform Assoc., 2024 Aug 24: ocae232. doi: 10.1093/jamia/ocae232. Online ahead of print. [PubMed].

Stefanakis K, Samiotaki M, Papaevangelou V, Valenzuela-Vallejo L, Giannoukakis N, Mantzoros CS. 2024, "Longitudinal proteomics of leptin treatment in humans with acute and chronic energy deficiency-induced hypoleptinemia reveal novel, mainly immune-related, pleiotropic effects.", Metabolism., 2024 Oct; 159:155984. doi: 10.1016/j.metabol.2024.155984. Epub 2024 Aug 2. [PubMed].

Angelopoulou E, Kitani R.-A, Stroggilos R, Lygirou V, Vasilakis I.-A, Letsou K, Vlahou A, Zoidakis J, Samiotaki M, Kanaka-Gantenbein, C. et al. 2024, "Tear Proteomics in Children and Adolescents with Type 1 Diabetes: A Promising Approach to Biomarker Identification of Diabetes Pathogenesis and Complications", Int. J. Mol. Sci. 2024, 25, 9994. [doi].

Theodoros Rampias, Thomas Antoniou, Annelies Stevaert, Lara Kravariti, Benjamin Van Loy, Julie Vandeput, Jacopo Sgrignani, Natalia Filippidou, Patrizia Locatelli, Samiotaki M, Eleftherios Paraskevas Tzakos, Andrea Cavalli, Lieve Naesens, Diamantis C. Sideris, Andreas G. Tzakos. 2024, "Exploration of isatin-based inhibitors of SARS-CoV-2 Nsp15 endoribonuclease", European Journal of Medicinal Chemistry, 2024, 116886, ISSN 0223-5234, [doi].

Theodosios Theodosiou, Konstantinos Vrettos, Ismini Baltsavia, Fotis Baltoumas, Nikolas Papanikolaou, Andreas Ν Antonakis, Dimitrios Mossialos, Christos A Ouzounis, Vasilis J Promponas, Makrina Karaglani, Ekaterini Chatzaki, Sven Brandau, Georgios A Pavlopoulos, Evangelos Andreakos, Ioannis Iliopoulos. 2024, "BioTextQuest v2.0: An evolved tool for biomedical literature mining and concept discovery", Comput Struct Biotechnol J, 2024 Aug 21: 23:3247-3253. doi: 10.1016/j.csbj.2024.08.016. eCollection 2024 Dec. [PubMed].

Athanasios Armakolas, Nektarios Alevizopoulos, Martha Stathaki, Constantina Petraki, George Agrogiannis, Martina Samiotaki, George Panayotou, Eirini Chatzinikita, Michael Koutsilieris. 2024, "Anti-PEc: Development of a novel monoclonal antibody against prostate cancer", Br J Cancer., 2024 Jun 20. doi: 10.1038/s41416-024-02713-8. Online ahead of print. [PubMed].

Camille Moeckel, Manvita Mareboina, Maxwell A Konnaris, Candace S Y Chan, Ioannis Mouratidis, Austin Montgomery, Nikol Chantzi, Georgios A Pavlopoulos, Ilias Georgakopoulos-Soares. 2024, "A survey of k-mer methods and applications in bioinformatics", Comput Struct Biotechnol J., 2024 May 21: 23:2289-2303. doi: 10.1016/j.csbj.2024.05.025. eCollection 2024 Dec. [PubMed].

Eleni Aplakidou, Nikolaos Vergoulidis, Maria Chasapi, Nefeli K Venetsianou, Maria Kokoli, Eleni Panagiotopoulou, Ioannis Iliopoulos, Evangelos Karatzas, Evangelos Pafilis, Ilias Georgakopoulos-Soares, Nikos C Kyrpides, Georgios A Pavlopoulos, Fotis A Baltoumas. 2024, "Visualizing metagenomic and metatranscriptomic data: A comprehensive review", Comput Struct Biotechnol J., 2024 May 3: 23:2011-2033. doi: 10.1016/j.csbj.2024.04.060. eCollection 2024 Dec. [PubMed].

Stylianaki EA, Mouchlis VD, Magkrioti C, Papavasileiou KD, Afantitis A, Matralis AN, Aidinis V. 2024, "Identification of two novel chemical classes of Autotaxin (ATX) inhibitors using Enalos Asclepios KNIME nodes.", Bioorg Med Chem Lett., 2024 May 1; 103:129690 [PubMed].

Zerva MC, Triantafylloudis C, Paspaliaris V, Skoulakis EMC, Papanikolopoulou K. 2024, "Choline Metabolites Reverse Differentially the Habituation Deficit and Elevated Memory of Tau Null Drosophila.", Cells., 2024 Apr 25; 13(9):746. doi: 10.3390/cells13090746. [PubMed].

Ioannis Mouratidis, Fotis A Baltoumas, Nikol Chantzi, Michail Patsakis, Candace S Y Chan, Austin Montgomery, Maxwell A Konnaris, Eleni Aplakidou, George C Georgakopoulos, Anshuman Das, Dionysios V Chartoumpekis, Jasna Kovac, Georgios A Pavlopoulos, Ilias Georgakopoulos-Soares. 2024, "kmerDB: A database encompassing the set of genomic and proteomic sequence information for each species", Comput Struct Biotechnol J. , 2024 Apr 21:23: 1919-1928. doi: 10.1016/j.csbj.2024.04.050. eCollection 2024 Dec. [PubMed].

Atsoniou K, Giannopoulou E, Georganta EM, Skoulakis EMC. 2024, "Drosophila Contributions towards Understanding Neurofibromatosis 1.", Cells., 2024 Apr 21; 13(8):721. doi: 10.3390/cells13080721. [PubMed].

Christina Arseni, Martina Samiotaki, George Panayotou, George Simos, Ilias Mylonis. 2024, "Combinatorial regulation by ERK1/2 and CK1δ protein kinases leads to HIF-1α association with microtubules and facilitates its symmetrical distribution during mitosis", Cell Mol Life Sci., 2024 Feb 1; 81(1):72. doi: 10.1007/s00018-024-05120-7. [PubMed].

Martina Samiotaki, George Panayotou, Panagiotis Chandris. 2024, "Detection of Protein Tyrosine Phosphatase Interacting Partners by Mass Spectrometry", Methods Mol Biol. , 2024:2743 :165-180. doi: 10.1007/978-1-0716-3569-8_11. [PubMed].

Arseni C, Samiotaki M, Panayotou G, Simos G, Mylonis I. 2024, "Combinatorial regulation by ERK1/2 and CK1δ protein kinases leads to HIF-1α association with microtubules and facilitates its symmetrical distribution during mitosis.", Cell Mol Life Sci., 2024 Feb 1; 81(1):72. doi: 10.1007/s00018-024-05120-7. [PubMed].

Tsopela V, Korakidis E, Lagou D, Kalliampakou KI, Milona RS, Kyriakopoulou E, Mpekoulis G, Gemenetzi I, Stylianaki EA, Sideris CD, Sioli A, Kefallinos D, Sideris DC, Aidinis V, Eliopoulos AG, Kambas K, Vassilacopoulou D, Vassilaki N. 2024, "L-Dopa decarboxylase modulates autophagy in hepatocytes and is implicated in dengue virus-caused inhibition of autophagy completion. ", Biochim Biophys Acta Mol Cell Res., 2024 Jan; 1871(1):119602. [PubMed].