BioIT unit
Overview
BSRC Fleming’s BioIT unit is concerned
with data acquisition and integration from wet lab scientists both
inside and outside the institute. Unit members focus on building,
maintaining and providing biological databases and information services
for the research community. Excellency of data curation and appliance of
cutting edge technology have placed the unit in the centre of recent
developments in the field of biological resources.
Current BioIT projects include:
•MMdb (www.mugen-noe.org/database/) - a database of murine animal
models of immune processes and immunological diseases (Aidinis et al.,
2008). Phenotypic description is standardized and hierarchically
structured, based on MGI’s mammalian phenotypic ontology terms and
recently implemented PATO logical definitions.
•TgDb (www.fleming.gr/tgdb/) - a virtual repository of genetically
modified mice expressing Cre recombinase and other conditional systems
under the control of cell-specific promoters/enhancers.
•MRB (www.fleming.gr/mrb/) - a ‘database of mouse databases’ that
includes an updated mouse resource list, comments on scientific content,
basic categorization of all resources, a search interface that helps
users to detect the most appropriate database according to their
request, a scoring system and user comment’s board thus allowing users
to share their opinion on an included mouse resource.
•EMI (www.fleming.gr/emi) – a web service client, a simple web
application that handles data representation for MMdb and TgDb and also
provides a simple query interface for both resources.
Visit the
BioIT Unit’s Website
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